Ageitos, J., Sánchez-Pérez, A., Calo-Mata, P. and Villa, T. (2017). Antimicrobial peptides (AMPs): Ancient compounds that represent novel weapons in the fight against bacteria. Biochemical Pharmacology, 133: 117- 138. https://doi.org/10.1016/j.bcp.2016.09.018
Agha Alikhani, M., Iranpour, A. and Naghdi Badi, H. (2013). Changes in agronomical and phytochemical yield of purple coneflower (Echinaceae purpurea (L.) Moench) under urea and three biofertilizers application. Journal of Medicinal Plants, 12: 121-136.
Ahmad, B., Yao, J., Zhang, S., Li, X., Zhang, X., Yadav, V. and Wang, X. (2020). Genome-wide characterization and expression profiling of GASA genes during different stages of seed development in grapevine (Vitis vinifera L.) predict their involvement in seed development. International Journal of Molecular Sciences, 21: 1088. https://doi.org/10.3390/ijms21031088
Bailey, T.L., Boden, M., Buske, F.A., Frith, M., Grant, C.E., Clementi, L., Ren, J., Li, W.W. and Noble, W.S. (2009). MEME SUITE: tools for motif discovery and searching. Nucleic Acids Research, 37: 202-208. https://doi.org/10.1093/nar/gkp335
Boroun, H., Siahpoosh, A., Sohrabi, S.M., Nikbakht, M.R., Ghasemian Yadegari, J., Mohammadi, M. and Sohrabi, S.S.J.C.B. (2021). Identification and characterization of some snakin gene family members in onion (Allium cepa L.). Crop Biotechnology,10: 79-92 (In Persian).
Bouteraa, M.T., Ben Romdhane, W., Baazaoui, N., Alfaifi, M.Y., Chouaibi, Y., Ben Akacha, B., Ben Hsouna, A., Kačániová, M., Ćavar Zeljković, S. and Garzoli, S. (2023). GASA proteins: Review of their functions in plant environmental stress tolerance. Plants, 12: 2045. https://doi.org/10.3390/plants12102045
Campos, M.L., de Souza, C.M., de Oliveira, K.B.S., Dias, S.C. and Franco, O.L. (2018). The role of antimicrobial peptides in plant immunity. Journal of Experimental Botany, 69: 4997-5011. https://doi.org/10.1093/jxb/ery294
Coelho, J., Barros, L., Dias, M.I., Finimundy, T.C., Amaral, J.S., Alves, M.J., Calhelha, R.C., Santos, P.F. and Ferreira, I.C. (2020). Echinacea purpurea (L.) Moench: chemical characterization and bioactivity of its extracts and fractions. Pharmaceuticals, 13: 125. https://doi.org/10.3390/ph13060125
Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M. and Robles, M. (2005). Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics, 21: 3674-3676. https://doi.org/10.1093/bioinformatics/bti610
Darqui, F.S., Radonic, L.M., Beracochea, V.C., Hopp, H.E. and López Bilbao, M. (2021). Peculiarities of the transformation of Asteraceae family species: the cases of sunflower and lettuce. Frontiers in Plant Science, 12: 767459. https://doi.org/10.3389/fpls.2021.767459
Dobrange, E., Peshev, D., Loedolff, B. and Van den Ende, W. (2019). Fructans as immunomodulatory and antiviral agents: The case of Echinacea. Biomolecules, 9: 615. https://doi.org/10.3390/biom9100615
Ferrè, F. and Clote, P. (2005). DiANNA: a web server for disulfide connectivity prediction. Nucleic Acids Research, 33: 230-232. https://doi.org/10.1093/nar/gki412
Filiz ,E. and Kurt, F. (2020). Antimicrobial peptides Snakin/GASA gene family in sorghum (Sorghum bicolor): Genome-wide identification and bioinformatics analyses. Gene Reports, 20: 100766. https://doi.org/10.1016/j.genrep.2020.100766
Gasteiger, E., Hoogland, C., Gattiker, A., Wilkins, M.R., Appel, R.D. and Bairoch, A. (2005). Protein identification and analysis tools on the ExPASy server. The proteomics protocols handbook: 571-607. https://doi.org/10.1385/1-59259-890-0:571
Guo, X., Zhu, S., Xue, Y., Lin, Y., Mao, J., Li, S., Liang, C., Lu, X. and Tian, J. (2024). The stylo cysteine- rich peptide sgsnakin1 is involved in aluminum tolerance through enhancing reactive oxygen species scavenging. International Journal of Molecular Sciences, 25(12): 6672. https://doi.org/10.3390/ijms25126672
Haas, B.J., Papanicolaou, A., Yassour, M., Grabherr, M., Blood, P.D., Bowden, J., Couger, M.B., Eccles, D., Li, B. and Lieber, M. (2013). De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. Nature Protocols, 8: 1494-1512. https://doi.org/10.1038/nprot.2013.084
Hajimehdipoor, H., Khanavi, M., Shekarchi, M., Abedi, Z. and Pirali Hamedani, M. (2009). Investigation of the best method for extraction of phenolic compounds from Echinaceae purpurea L. (Moench). Journal of Medicinal Plants, 8: 145-152.
Harris, P.W., Yang, S.H., Molina, A., López, G., Middleditch, M. and Brimble, M.A. (2014). Plant antimicrobial peptides snakin‐1 and snakin‐2: chemical synthesis and insights into the disulfide connectivity. Chemistry-A European Journal, 20: 5102-5110. https://doi.org/10.1002/chem.201303207
Iqbal, A. and Khan, R.S. (2023). Snakins: antimicrobial potential and prospects of genetic engineering for enhanced disease resistance in plants. Molecular Biology Reports, 50: 8683-8690. https://doi.org/10.1007/s11033-023-08734-5
Koehbach, J. and Craik, D.J. (2019). The vast structural diversity of antimicrobial peptides. Trends in Pharmacological Sciences, 40: 517-528. https://doi.org/10.1016/j.tips.2019.04.012
Krogh, A., Larsson, B., von Heijne, G. and Sonnhammer, E.L. (2001). Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. Journal of Molecular Biology, 305: 567-80. https://doi.org/10.1006/jmbi.2000.4315
Kumar, S., Stecher, G., Li, M., Knyaz, C. and Tamura, K. (2018). MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Molecular Biology and Evolution, 35: 1547-1549. https://doi.org/10.1093/molbev/msy096
Lazzaro, B.P., Zasloff, M. and Rolff, J. (2020). Antimicrobial peptides: Application informed by evolution. https://doi.org/10.1126/science.aau5480
Luong, H.X., Thanh, T.T. and Tran, T.H. (2020). Antimicrobial peptides-Advances in development of therapeutic applications. Life Sciences, 260: 118407. https://doi.org/10.1016/j.lfs.2020.118407
Mansour, S.C., Pena, O.M. and Hancock, R.E. (2014). Host defense peptides: front-line immunomodulators. Trends in Immunology, 35: 443-450. https://doi.org/10.1016/j.it.2014.07.004
Mareri, L., Parrotta, L. and Cai, G. (2022). Environmental Stress and Plants. International Journal of Molecular Sciences, 23(10): 5416. https://doi.org/10.3390/ijms23105416
Matsuzaki, K. (2019). Antimicrobial Peptides. Springer, Singapore, SG. https://doi.org/10.1007/978-981-13-3588-4
Nahirñak, V., Almasia, N.I., Hopp, H.E. and Vazquez-Rovere, C. (2012). Snakin/GASA proteins: involvement in hormone crosstalk and redox homeostasis. Plant signaling & Bbehavior, 7: 1004-1008. https://doi.org/10.4161/psb.20813
Nahirñak, V., Almasia, N.I., Lia, V.V., Hopp, H.E. and Vazquez Rovere, C. (2024). Unveiling the defensive role of Snakin-3, a member of the subfamily III of Snakin/GASA peptides in potatoes. Plant Cell Reports, 43(2): 47. https://doi.org/10.1007/s00299-023-03108-4
Nahirñak, V., Rivarola, M., Gonzalez de Urreta, M., Paniego, N., Hopp, H.E., Almasia, N.I. and Vazquez- Rovere, C.J.A.j.o.p.r. (2016). Genome-wide analysis of the Snakin/GASA gene family in Solanum tuberosum cv. Kennebec. 93: 172-188. https://doi.org/10.1007/s12230-016-9494-8
Nawaz, Z., Kakar, K.U., Ullah, R., Yu, S., Zhang, J., Shu, Q.-Y. and Ren, X.-l. (2019). Genome-wide identification, evolution and expression analysis of cyclic nucleotide-gated channels in tobacco (Nicotiana tabacum L.). Genomics, 111: 142-158. https://doi.org/10.1016/j.ygeno.2018.01.010
Nawrot, R., Barylski, J., Nowicki, G., Broniarczyk, J., Buchwald, W. and Goździcka-Józefiak, A. (2014). Plant antimicrobial peptides. Folia Microbiologica, 59: 181-196. https://doi.org/10.1007/s12223-013-0280-4
Oliveira-Lima, M., Benko-Iseppon, A.M., Neto, J.R.C.F., Rodríguez-Decuadro, S., Kido, E.A., Crovella, S. and Pandolfi, V. (2017a). Snakin: Structure, roles and applications of a plant antimicrobial peptide. Current Protein and Peptide Science, 18(4): 368-374. https://doi.org/10.2174/1389203717666160619183140
Oliveira-Lima, M., Maria Benko-Iseppon, A., Ribamar Costa Ferreira Neto, J., Rodriguez-Decuadro, S., Akio Kido, E., Crovella, S. and Pandolfi, V. (2017b). Snakin: structure, roles and applications of a plant antimicrobial peptide. Current Protein and Peptide Science, 18: 368-374. https://doi.org/10.2174/1389203717666160619183140
Patil, N.A., Tailhades, J., Hughes, R.A., Separovic, F., Wade, J.D. and Hossain, M.A. (2015). Cellular disulfide bond formation in bioactive peptides and proteins. International journal of molecular sciences, 16: 1791-1805. https://doi.org/10.3390/ijms16011791
Porto, W.F. and Franco, O.L. (2013). Theoretical structural insights into the snakin/GASA family. Peptides, 44: 163-167. https://doi.org/10.1016/j.peptides.2013.03.014
Rodríguez-Decuadro, S., da Rosa, G., Radío, S., Barraco-Vega, M., Benko-Iseppon, A.M., Dans, P.D., Smircich, P. and Cecchetto, G. (2021). Antimicrobial peptides in the seedling transcriptome of the tree legume Peltophorum dubium. Biochimie, 180: 229-242. https://doi.org/10.1016/j.biochi.2020.11.005
Rodríguez-Decuadro, S., Ramos, S., Rodríguez-Ustra, M.J., Marques, A., Smircich, P. and Vaio, M. (2024). Transcriptome analysis of the allotetraploids of the Dilatata group of Paspalum (Poaceae): effects of diploidization on the expression of defensin and Snakin/GASA genes. Functional and Integrative Genomics, 24(6): 190. https://doi.org/10.1007/s10142-024-01466-0
Samriti, Biswas, R. and Biswas, K. (2018). Plant antimicrobial peptides: a novel approach against drug resistant microorganisms. International Journal of Pharmaceutical Sciences and Research, 9: 1-15.
Savolainen, V. and Chase, M.W. (2003). A decade of progress in plant molecular phylogenetics. Trends in Genetics, 19: 717-724. https://doi.org/10.1016/j.tig.2003.10.003
Schmidt, N.W. and Wong, G.C. (2013). Antimicrobial peptides and induced membrane curvature: Geometry, coordination chemistry, and molecular engineering. Current Opinion in Solid State and Materials Science, 17: 151-163. https://doi.org/10.1016/j.cossms.2013.09.004
Science, 368: eaau5480.
Sievers, F., Wilm, A., Dineen, D., Gibson, T.J., Karplus, K., Li, W., Lopez, R., McWilliam, H., Remmert, M., Söding, J., Thompson, J.D. and Higgins, D.G. (2011). Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Molecular Systems Biology, 7: 539. https://doi.org/10.1038/msb.2011.75
Su, T., Han, M., Cao, D. and Xu, M. (2020). Molecular and biological properties of snakins: the foremost cysteine-rich plant host defense peptides. Journal of Fungi, 6(4): 220. https://doi.org/10.3390/jof6040220
Taieb Bouteraa, M., Ben Akacha, B., Kačániová, M., Čmiková, N., Ben Romdhane, W., Baazaoui, N., Soltani, N., Chouaibi, Y., Ben Hsouna, A., Garzoli ,S. and Ben Saad, R. (2024). Exploring the antimicrobial and antioxidant properties of TdGASA2 protein: From molecular insights to a promising natural preservative for Tunisian cheese shelf-life enhancement. Food Bioscience, 61: 104884. https://doi.org/10.1016/j.fbio.2024.104884
Uncu, A.T., Patat, A.S. and Uncu, A.O. (2024). Whole-genome sequencing and identification of antimicrobial peptide coding genes in parsley (Petroselinum crispum), an important culinary and medicinal Apiaceae species. Functional and Integrative Genomics, 24(5): 142. https://doi.org/10.1007/s10142-024-01423-x
Vural, H.C. and Daǧeri ,A. (2009). Optimization of DNA isolation for RAPD-PCR analysis of selected (Echinaceae purpurea L. Moench) medicinal plants of conservation concern from Turkey. Journal of Medicinal Plants Research, 3: 16-19.
Waghu, F.H., Gopi, L., Barai, R.S., Ramteke ,P., Nizami, B. and Idicula-Thomas, S. (2014). CAMP: Collection of sequences and structures of antimicrobial peptides. Nucleic Acids Research, 42: 1154-1158. https://doi.org/10.1093/nar/gkt1157
Yu, C.S., Cheng, C.W., Su, W.C., Chang, K.C., Huang, S.W., Hwang, J.K. and Lu, C.H. (2014). CELLO2GO: a web server for protein subCELlular LOcalization prediction with functional gene ontology annotation. PLoS One, 9: e99368. https://doi.org/10.1371/journal.pone.0099368
Zhang, D ,.He, Y., Ye, Y., Ma, Y., Zhang, P., Zhu, H., Xu, N. and Liang, S. (2019). Little antimicrobial peptides with big therapeutic roles. Protein and Peptide Letters, 26: 564-578. https://doi.org/10.2174/1573406415666190222141905
Zhang, S. and Wang, X. (2008). Expression pattern of GASA, downstream genes of DELLA, in Arabidopsis. Chinese Science Bulletin, 53: 3839-3846. https://doi.org/10.1007/s11434-008-0525-9
Zhang, S. and Wang, X. (2017). One new kind of phytohormonal signaling integrator: Up-and-coming GASA family genes. Plant Signaling & Behavior, 12: e1226453. https://doi.org/10.1080/15592324.2016.1226453
Zimmermann, R., Sakai, H. and Hochholdinger, F. (2010). The gibberellic acid stimulated-like gene family in maize and its role in lateral root development. Plant Physiology, 152: 356-365. https://doi.org/10.1104/pp.109.149054