Scientific Journal

Investigation of the Expression of Genes Encoding UGP, 60s L23a and SAUR23 Proteins under Zn Deficiency Conditions in Zn-efficient and Zn-inefficient Bread Wheat cultivars

Document Type : Original Article

Authors

Department of Plant Production and Genetics, Faculty of Agriculture, Urmia University, Urmia, Iran

10.22034/pgr.2026.2077113.1023
Abstract
To evaluate the impact of zinc (Zn) deficiency stress on the expression of genes encoding UTP-glucose-1-phosphate uridylyltransferase (UGP), the auxin-responsive protein SAUR23 (SAUR23), and the ribosomal protein 60sL23a (60sL23a) in Zn-efficient and -inefficient cultivars of bread wheat, a factorial experiment was conducted in a completely randomized design with three replications under greenhouse conditions. Two cultivars, Niknejad (Zn-efficient) and Farin (Zn-inefficient), were grown under Zn-deficient and Zn-sufficient conditions (0 and 5 mg Zn kg⁻¹ soil, respectively). Gene expression levels were quantified in flag leaves and roots at two growth stages (30% heading and grain filling) using real-time PCR technique. The results indicated that the greatest increase in UGP expression (1.2-fold relative to the control) under Zn deficiency occurred in the flag leaf of the Farin cultivar at the 30% heading stage. This upregulation is likely associated with modulation of the sucrose biosynthesis pathway and enhanced allocation of photosynthates to developing grains. Moreover, SAUR23 expression in the flag leaf of the Niknejad cultivar increased approximately 3.5-fold compared with the control at the grain filling stage, suggesting a potential role in regulating polar auxin transport under Zn-deficient conditions. Expression of 60sL23a was also upregulated in the roots of both cultivars under Zn deficiency at the grain filling stage; however, the magnitude of induction was significantly greater in Niknejad than in Farin. This differential expression may be linked to enhanced translational regulation and energy-related signaling pathways. Overall, the elevated expression of SAUR23 and 60sL23a in the Zn-efficient cultivar Niknejad suggests that Zn-efficient bread wheat genotypes may mitigate Zn deficiency stress through targeted transcriptional regulation of genes involved in hormone signaling and protein synthesis.

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An, X., Jin, G., Zhang, J., Luo, X., Chen, C., Li, W. and Zhu, G. (2018). Protein responses in kenaf plants exposed to drought conditions determined using iTRAQ technology. FEBS Open Bio, 8(10): 1572-1583. https://doi.org/10.1002/2211-5463.12507
Asadzadeh, F. and Abdollahi Mandoulakani, B. (2024). The Effect of iron deficiency on the expression of genes encoding transcription factors bzip4, bzip79, and bzip97 in bread wheat (Triticum aestivum L.). Plant Genetic Research, 11(1): 1-14 (In Persian). http://dx.doi.org/10.22034/PGR.11.1.1
Broadley, M. R., White, P.J., Hammond, J.P., Zelko, I. and Lux, A. (2007). Zinc in plants. New Phytologist, 173(4): 677-702. https://doi.org/10.1111/j.1469-8137.2007.01996.x
Cheng, L., Zhang, S., Yang, L., Wang, Y., Yu, B. and Zhang, F. (2019). Comparative proteomics illustrates the complexity of Fe, Mn and Zn deficiency-responsive mechanisms of potato (Solanum tuberosum L.) plants in vitro. Planta, 250(1): 199-217. https://doi.org/10.1007/s00425-019-03163-w
Ciereszko, I., Johansson, H., Hurry, V. and Kleczkowski, L.A. (2001). Phosphate status affects the gene expression, protein content and enzymatic activity of UDP-glucose pyrophosphorylase in wild-type and pho mutants of Arabidopsis. Planta, 212(4): 598-605. https://doi.org/10.1007/s004250000424
Du, Z.R., Xi, J., Wan, J., Jiang, B., Xu, Y.J., Zhang, Q. and Xu, Z.J. (2008). Cloning and expression analysis of a ribosomal protein from rice (OsRPL14). Chinese Agricultural Science Bulletin, 24(4): 130-134.
Emenecker, R.J. and Strader, L.C. (2020). Auxin-abscisic acid interactions in plant growth and development. Biomolecules, 10(2): 281. https://doi.org/10.3390/biom10020281
Fakih, Z., Plourde, M.B. and Germain, H. (2023). Differential participation of plant ribosomal proteins from the small ribosomal subunit in protein translation under stress. Biomolecules, 13(7): 1160. https://doi.org/10.3390/biom13071160
González‐Esteban, Á.L. (2018). Patterns of world wheat trade, 1945-2010: The long hangover from the second food regime. Journal of Agrarian Change, 18(1): 87-111. https://doi.org/10.1111/joac.12219
Guarino, C., Conte, B., Spada, V., Arena, S., Sciarrillo, R. and Scaloni, A. (2014). Proteomic analysis of eucalyptus leaves unveils putative mechanisms involved in the plant response to a real condition of soil contamination by multiple heavy metals in the presence or absence of mycorrhizal/rhizobacterial additives. Environmental Science Technology, 48(19): 11487-11496. https://doi.org/10.1021/es502070m
Hafeez, B.M.K.Y., Khanif, Y.M. and Saleem, M. (2013). Role of zinc in plant nutrition-a review. American Journal of Experimental Agriculture, 3(2): 374-391. https://doi.org/10.9734/AJEA/2013/2746
Hassan, M.U., Aamer, M., Nawaz, M., Rehman, A., Aslam, T., Afzal, U. and Guoqin, H. (2021). Agronomic bio-fortification of wheat to combat zinc deficiency in developing countries. Pakistan Journal of Agricultural Research, 34(1): 201. https://doi.org/10.17582/journal.pjar/2021/34.1.201.217
Jasemi, S.S., Naghipour, F., Sanjani, S., Esfandiaripour, A., Khorsandi, H., Goodarz, N. (2017). Evaluation of grain quality characteristics of four bread wheat cultivars (Triticum aestivum L.) in wheat-producing provinces of the country. Journal of Iranian Agricultural Sciences, 19(2): 102-115 (In Persian).
Krishna, T.A., Ceasar, S.A., Maharajan, T., Ramakrishnan, M., Duraipandiyan, V., Al-Dhabi, N. A. and Ignacimuthu, S. (2017). Improving the zinc-use efficiency in plants: a review. Journal of Breeding Genetics, 49(3): 211-230.
Livak, K.J., and Schmittgen, T.D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2− ΔΔCT method. Methods, 25(4): 402-408. https://doi.org/10.1006/meth.2001.1262
Lucini, L. and Bernardo, L. (2015). Comparison of proteome response to saline and zinc stress in lettuce. Frontiers in Plant Science, 6: 240. https://doi.org/10.3389/fpls.2015.00240
Maret, W. (2013). Zinc biochemistry: from a single zinc enzyme to a key element of life. Advances in Nutrition, 4(1): 82-91. https://doi.org/10.3945/an.112.003038
McIntosh, K.B. and Bonham-Smith, P.C. (2005). The two ribosomal protein L23A genes are differentially transcribed in Arabidopsis thaliana. Genome, 48(3): 443-454. https://doi.org/10.1139/g05-007
Nakabayashi, R. and Saito, K. (2015). Integrated metabolomics for abiotic stress responses in plants. Current Opinion in Plant Biology, 24: 10-16. https://doi.org/10.1016/j.pbi.2015.01.003
Ranhbar, F., Abdollahi Mandoulakani, B. and Ghasemzadeh, R. (2023). The effect of iron deficiency on the relative expression of genes encoding catalase, ascorbate peroxidase and polyphenol oxidase enzymes in bread wheat. Plant Genetic Research, 10(1): 145-156 (In Persian). http://dx.doi.org/10.22034/pgr.10.1.9
Roy, C., Kumar, S., Ranjan, R.D., Kumhar, S.R. and Govindan, V. (2022). Genomic approaches for improving grain zinc and iron content in wheat. Frontiers in Genetics, 13: 1045955. https://doi.org/10.3389/fgene.2022.1045955
Salehi, S., Abdollahi Mandoulakani, B., Alipour, H. and Moradi Gangachin, K. (2021). Expression pattern of genes encoding carbonic anhydrase, peroxidase and glutathione S-transferase enzymes in bread wheat under zinc deficiency conditions. Cereal Research, 11(3): 193-204 (In Persian).
Shakouri, M. (2022). proteome analysis of bread wheat root under soil zinc deficiency condition. Ph.D. Thesis, Urmia University, Urmia, Iran.
Stortenbeker, N. and Bemer, M. (2019). The SAUR gene family: the plant's toolbox for adaptation of growth and development. Journal of Experimental Botany, 70(1): 17-27. https://doi.org/10.1093/jxb/ery332
Yang, D., Liu, Y., Cheng, H., Chang, L., Chen, J., Chai, S., and Li, M. (2016). Genetic dissection of flag leaf morphology in wheat (Triticum aestivum L.) under diverse water regimes. BMC Genetics, 17(1): 94. https://doi.org/10.1186/s12863-016-0399-9
Yu, C., Sun, C., Shen, C., Wang, S., Liu, F., Liu, Y. and Qi, Y. (2015). The auxin transporter, Os AUX 1, is involved in primary root and root hair elongation and in Cd stress responses in rice (Oryza sativa L.). The Plant Journal, 83(5): 818-830. https://doi.org/10.1111/tpj.12929
Zeng, H., Zhang, X., Ding, M., Zhang, X. and Zhu, Y. (2019). Transcriptome profiles of soybean leaves and roots in response to zinc deficiency. Physiologia Plantarum, 167(3): 330-351. https://doi.org/10.1111/ppl.12894
Zhu, Q., Zheng, H., Hu, X., Liu, Y., Zheng, X., Li, L. and Tang, M. (2024). Genome-Wide analysis of the SAUR gene family and its expression profiles in response to salt stress in Santalum album. Plants, 13(10): 1286. https://doi.org/10.3390/plants13101286